Stem-loop stu-MIR8036

Accession

MI0025855

Description

Solanum tuberosum stu-MIR8036 precursor miRNA

Sequence

GGAGGAAUCGAAAGAUAUAAGgauuuauuuauuuuuucaauuugauuggaaaaauagaaaaaaaaagaauUAUGUCUUUCCGAUGCCUCCCA
(((((.((((((((((((((...(((.((((((((((((((...)))))))))))))).....)))...)))))))))).)))).)))))..

Structure

--     A    -          Gga   ----a              u 
  GGAGG AUCG AAAGAUAUAA   uuu     uuuauuuuuucaau  
  ||||| |||| ||||||||||   |||     |||||||||||||| u
  CCUCC UAGC UUUCUGUAUu   aaa     agauaaaaagguua  
AC     G    C          aag   aaaaa              g 

Annotation confidence Not enough data

Genome context

JH138005.1: 141241-141332 [-]

Mature stu-miR8036-5p

• Accession: MIMAT0031215
• Description: Solanum tuberosum stu-miR8036-5p mature miRNA
• Sequence: 1 - GGAGGAAUCGAAAGAUAUAAG - 21
• Evidence: experimental ; Illumina [1]

Mature stu-miR8036-3p

• Accession: MIMAT0030946
• Description: Solanum tuberosum stu-miR8036-3p mature miRNA
• Sequence: 71 - UAUGUCUUUCCGAUGCCUCCCA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233