Stem-loop stu-MIR8046

Accession

MI0025870

Description

Solanum tuberosum stu-MIR8046 precursor miRNA

Sequence

UAUGAUCGAAGUUUCAAUGACauacuuuaauuuaauaggguccuaauuaaauuaaguuguauCGCUGAAAUUUCGAUCAUAAU
((((((((((((((((.(((.(((.(((((((((((((....)).))))))))))).))).))).))))))))))))))))..

Structure

--                A   C   c           -  g 
  UAUGAUCGAAGUUUCA UGA aua uuuaauuuaau ag g
  |||||||||||||||| ||| ||| ||||||||||| ||  
  AUACUAGCUUUAAAGU GCu ugu gaauuaaauua uc u
UA                C   a   u           a  c 

Annotation confidence Not enough data

Genome context

JH137928.1: 1284990-1285072 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from stu-MIR8046

Mature stu-miR8046-5p

• Accession: MIMAT0030961
• Description: Solanum tuberosum stu-miR8046-5p mature miRNA
• Sequence: 1 - UAUGAUCGAAGUUUCAAUGAC - 21
• Evidence: experimental ; Illumina [1]

Mature stu-miR8046-3p

• Accession: MIMAT0031225
• Description: Solanum tuberosum stu-miR8046-3p mature miRNA
• Sequence: 63 - CGCUGAAAUUUCGAUCAUAAU - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233