miRBase entry: stu-MIR5303j

Stem-loop stu-MIR5303j


Accession
MI0025926
Description
Solanum tuberosum stu-MIR5303j precursor miRNA
Gene family
MIPF0001432; MIR5303

Literature search
3 open access papers mention stu-MIR5303j
(7 sentences)

Sequence

gcucggacuauucaaauugcugccccacccuguguaagauccuccaaaaaugacuacuuuugaaggauuaaacacgcauccggcAAUAUUUUUGAAGAGUCUGAGCAA
(((((((((.((((((....((((......(((((..((((((.(((((........))))).))))))..))))).....)))).....)))))).)))))))))..

Structure
--         a      -uugc    ccaccc     aa      c     aug 
  gcucggacu uucaaa     ugcc      ugugu  gauccu caaaa   a
  ||||||||| ||||||     ||||      |||||  |||||| |||||    
  CGAGUCUGA AAGUUU     Acgg      gcaca  uuagga guuuu   c
AA         G      UUAUA    -ccuac     aa      a     cau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH137863.1: 893617-893724 [+]

Database links

Mature stu-miR5303j

Accession MIMAT0031241
Description Solanum tuberosum stu-miR5303j mature miRNA
Sequence 85 - AAUAUUUUUGAAGAGUCUGAGCAA - 108
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233