miRBase entry: stu-MIR5303g

Stem-loop stu-MIR5303g


Accession
MI0025927
Description
Solanum tuberosum stu-MIR5303g precursor miRNA
Gene family
MIPF0001432; MIR5303

Literature search
3 open access papers mention stu-MIR5303g
(7 sentences)

Sequence

ugcucggacccucaaaagauguucucggauccuccaaaaauacauagcuuuuggaggauccgacacguagAUAUUUUUGAAGAGUCUGAGCAAC
(((((((((.((..(((((((((.(((((((((((((((.........)))))))))))))))......)))))))))..)).)))))))))..

Structure
--         c  ca         -----c               aua 
  ugcucggac cu  aaagauguu      ucggauccuccaaaa   c
  ||||||||| ||  |||||||||      |||||||||||||||   a
  ACGAGUCUG GA  UUUUUAUAg      agccuaggagguuuu   u
CA         A  AG         augcac               cga 


Annotation confidence Not enough data
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Genome context
JH137902.1: 155453-155546 [+]

Database links

Mature stu-miR5303g

Accession MIMAT0031242
Description Solanum tuberosum stu-miR5303g mature miRNA
Sequence 71 - AUAUUUUUGAAGAGUCUGAGCAAC - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233