miRBase entry: stu-MIR5303i

Stem-loop stu-MIR5303i


Accession
MI0025929
Description
Solanum tuberosum stu-MIR5303i precursor miRNA
Gene family
MIPF0001432; MIR5303

Literature search
3 open access papers mention stu-MIR5303i
(7 sentences)

Sequence

uacucguacucuccaaaaauguugucucacccgugucgaauucaaaaauacacuauuuuuggaguauccgacgcacaaccuucgAUAUUUUUGAAGAGUCUGAGCAAC
..((((.(((((.(((((((((((........((((((..((((((((((...)))))))))).....))))))........))))))))))).))))).))))....

Structure
--ua    u     c           ucucaccc      ---aa          c 
    cucg acucu caaaaauguug        gugucg     uucaaaaaua  
    |||| ||||| |||||||||||        ||||||     |||||||||| a
    GAGU UGAGA GUUUUUAUAgc        cgcagc     agguuuuuau  
CAAC    C     A           uuccaaca      cuaug          c 


Annotation confidence Not enough data
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Genome context
JH138109.1: 42382-42489 [+]

Database links

Mature stu-miR5303i

Accession MIMAT0031244
Description Solanum tuberosum stu-miR5303i mature miRNA
Sequence 85 - AUAUUUUUGAAGAGUCUGAGCAAC - 108
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233