miRBase entry: stu-MIR391

Stem-loop stu-MIR391


Accession
MI0025950
Description
Solanum tuberosum stu-MIR391 precursor miRNA
Gene family
MIPF0001809; MIR4376


Sequence

UACGCAGGAGAGAUGAUGCUGgacgauagagauaugagaauauuaaaggggcuuuaauuuauuggccaGCAUCAUACUCCUGCAUAUU
...(((((((..((((((((((.(((((((.....(((.............)))...))))))).)))))))))).))))))).....

Structure
--UAC       AG          a       gauau   aauau 
     GCAGGAG  AUGAUGCUGg cgauaga     gag     u
     |||||||  |||||||||| |||||||     |||     a
     CGUCCUC  UACUACGacc guuauuu     uuc     a
UUAUA       -A          g       --aau   gggga 


Annotation confidence Not enough data
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Genome context
JH137834.1: 1355044-1355131 [-]

Database links

Mature stu-miR391-5p

Accession MIMAT0031274
Description Solanum tuberosum stu-miR391-5p mature miRNA
Sequence 1 - UACGCAGGAGAGAUGAUGCUG - 21
Evidence experimental
Illumina [1]

Mature stu-miR391-3p

Accession MIMAT0031275
Description Solanum tuberosum stu-miR391-3p mature miRNA
Sequence 69 - GCAUCAUACUCCUGCAUAUU - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233