miRBase entry: stu-MIR160b

Stem-loop stu-MIR160b


Accession
MI0025956
Description
Solanum tuberosum stu-MIR160b precursor miRNA
Gene family
MIPF0000032; MIR160

Literature search
3 open access papers mention stu-MIR160b
(9 sentences)

Sequence

UGCCUGGCUCCCUGUAUGCCAcacacuuucaccaauucuuugauugacugaucaguggguggcgugcgaggagccaagcaua
(((.(((((((.((((((((((.((((.(((.(((((....)))))..)))..)))).)))))))))).))))))).)))..

Structure
--   C       C          a    -u   -c     c 
  UGC UGGCUCC UGUAUGCCAc cacu  uca  caauu u
  ||| ||||||| |||||||||| ||||  |||  |||||  
  acg accgagg gcgugcggug guga  agu  guuag u
au   a       a          g    cu   ca     u 


Annotation confidence Not enough data
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Genome context
JH138023.1: 757259-757340 [-]

Database links

Mature stu-miR160b

Accession MIMAT0031285
Description Solanum tuberosum stu-miR160b mature miRNA
Sequence 1 - UGCCUGGCUCCCUGUAUGCCA - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233