miRBase entry: stu-MIR156c

Stem-loop stu-MIR156c


Accession
MI0025964
Description
Solanum tuberosum stu-MIR156c precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
9 open access papers mention stu-MIR156c
(22 sentences)

Sequence

UUGACAGAAGAUAGAGAGCACgaauaauggaagcugcaugcaccuuaauucuuugugcucucuauucuucugucauca
.(((((((((((((((((((((((.(((((..((.....))..))..))).))))))))))))).))))))))))...

Structure
--U          -             u   --  aa  u 
   UGACAGAAGA UAGAGAGCACgaa aau  gg  gc g
   |||||||||| ||||||||||||| |||  ||  || c
   acugucuucu aucucucguguuu uua  uc  cg a
acu          u             c   au  ca  u 


Annotation confidence Not enough data
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Genome context
JH138045.1: 664569-664646 [-]

Database links

Mature stu-miR156c

Accession MIMAT0031298
Description Solanum tuberosum stu-miR156c mature miRNA
Sequence 1 - UUGACAGAAGAUAGAGAGCAC - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233