miRBase entry: stu-MIR156d

Stem-loop stu-MIR156d


Accession
MI0025965
Description
Solanum tuberosum stu-MIR156d precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
10 open access papers mention stu-MIR156d
(24 sentences)

Sequence

UUGACAGAAGAUAGAGAGCACuaaugaugauaugcuaauuucauucagcaaaagcaucucacuucauuuguGCUCUCUAUGCUUCUGUCAUCA
.((((((((((((((((((((.((((((((.(((((................))))).)))..))))).))))))))))).)))))))))...

Structure
--U         -           u     --   u     aauuuca 
   UGACAGAAG AUAGAGAGCAC aauga  uga augcu       u
   ||||||||| ||||||||||| |||||  ||| |||||        
   ACUGUCUUC UAUCUCUCGug uuacu  acu uacga       u
ACU         G           u     uc   c     aaacgac 


Annotation confidence Not enough data
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Genome context
JH138336.1: 107387-107479 [+]

Database links

Mature stu-miR156d-5p

Accession MIMAT0031299
Description Solanum tuberosum stu-miR156d-5p mature miRNA
Sequence 1 - UUGACAGAAGAUAGAGAGCAC - 21
Evidence experimental
Illumina [1]

Mature stu-miR156d-3p

Accession MIMAT0031300
Description Solanum tuberosum stu-miR156d-3p mature miRNA
Sequence 72 - GCUCUCUAUGCUUCUGUCAUCA - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233