miRBase entry: mmu-mir-8090

Stem-loop mmu-mir-8090


Accession
MI0026017
Symbol
MGI: Mir8090
Description
Mus musculus mmu-mir-8090 precursor miRNA


Sequence

234 reads, 40 reads per million, 24 experiments
guagcucagaguuuuaaguuucacccaucguacagggaaguccaggccuccgcacugggcuccugaugugcagucaGAAGCGCAGUGGAGGUCUGUguacugcccacgucucuuccugcuuuuauauagucuguga
....(.((((.(...((((.........(((...(((.(((((((((((((..((((.(((.(((((.....))))).))).))))))))))))).).))).)))))).........))))......).)))).).

Structure
guag u    g ---uuu    uucacccau   aca   a   - -         gc    g   c     g 
    c caga u      aagu         cgu   ggg agu c caggccucc  acug gcu cugau u
    | |||| |      ||||         |||   ||| ||| | |||||||||  |||| ||| ||||| g
    g gucu a      uucg         gca   ccc uca g GUCUGGAGG  UGAC CGA Gacug c
---a u    g uauauu    uccuucucu   ---   g   u U         --    G   A     a 


Annotation confidence Not enough data
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Genome context
chr19: 47755022-47755157 [-]

Database links

Mature mmu-miR-8090

Accession MIMAT0031391
Description Mus musculus mmu-miR-8090 mature miRNA
Sequence 77 - GAAGCGCAGUGGAGGUCUGU - 96
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23185045
    Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
    "Polikepahad S, Corry DB"
    "Nucleic Acids Res (2013) 41:1164-1177