miRBase entry: mmu-mir-8100

Stem-loop mmu-mir-8100


Accession
MI0026029
Symbol
MGI: Mir8100
Description
Mus musculus mmu-mir-8100 precursor miRNA


Sequence

95 reads, 287 reads per million, 36 experiments
gccagcaaguaaacaaugacugucccaggaAGGAGGAAAGGGAGCAAGCAGGUgugaccuucuccgcccgccccuuccuuuccccccucugggucuggagcacugggaacuuacuuggcuu
(((((.((((...((.((.((.(((((((..((.((((((((((...((.((((.((.....)))))).))..))))))))))))..))))))...).)))).))...)))).).))))..

Structure
--    - c    aaa  a  a  g ---      aA  A          CAA  A    u  c 
  gcca g aagu   ca ug cu u   cccagg  GG GGAAAGGGAG   GC GGUg ga c
  |||| | ||||   || || || |   ||||||  || ||||||||||   || |||| || u
  cggu c uuca   gu ac ga g   gggucu  cc ccuuuccuuc   cg ccgc cu u
uu    u a    agg  c  -  g ucu      cc  -          -cc  c    -  c 


Annotation confidence Not enough data
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Genome context
chr11: 46102270-46102390 [+]

Database links

Mature mmu-miR-8100

Accession MIMAT0031403
Description Mus musculus mmu-miR-8100 mature miRNA
Sequence 31 - AGGAGGAAAGGGAGCAAGCAGGU - 53
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23185045
    Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
    "Polikepahad S, Corry DB"
    "Nucleic Acids Res (2013) 41:1164-1177