Stem-loop mmu-mir-8116

Accession

MI0026048

Symbol

MGI: Mir8116

Description

Mus musculus mmu-mir-8116 precursor miRNA

Sequence

33 reads, 2 reads per million, 20 experiments

gagccugguguugaggggagAAGGAUCCGGGGCUAGUUGGCgucagccaaagggccuuauaaucgccaacuauuucuguaucuucucucuuuucccc
......((.(..(((((((((((.((.(((((.(((((((((...(((....)))........))))))))).))))).))))))))))))).))).

Structure

gagccu  u uu           G  C     C         -----uca   a 
      gg g  gaggggagAAG AU CGGGG UAGUUGGCg        gcc a
      || |  ||||||||||| || ||||| |||||||||        |||  
      cc c  uuucucucuuc ua gucuu aucaaccgc        cgg a
-----c  - -u           -  u     u         uaauauuc   g 

Annotation confidence Not enough data

Genome context

chr5: 137293780-137293876 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-8116

Mature mmu-miR-8116

• Accession: MIMAT0031422
• Description: Mus musculus mmu-miR-8116 mature miRNA
• Sequence: 21 - AAGGAUCCGGGGCUAGUUGGC - 41
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23185045
   Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2
   "Polikepahad S, Corry DB"
   "Nucleic Acids Res (2013) 41:1164-1177