miRBase entry: ppe-MIR166b

Stem-loop ppe-MIR166b


Accession
MI0026074
Description
Prunus persica ppe-MIR166b precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
7 open access papers mention ppe-MIR166b
(36 sentences)

Sequence

aguugaggggaaugucgucugguucgagauccuucacaaccguggagcuuaagcauagucugaaugauuUCGGACCAGGCUUCAUUCCCCucaacu
((((((((((((((..(((((((((((((((.((((..((.(((.........))).)).)))).)))))))))))))))..))))))))))))))

Structure
              uc               c    ca  c   gag 
aguugaggggaaug  gucugguucgagauc uuca  ac gug   c
||||||||||||||  ||||||||||||||| ||||  || |||   u
ucaacuCCCCUUAC  CGGACCAGGCUuuag aagu  ug uac   u
              UU               u    -c  a   gaa 


Annotation confidence Not enough data
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Genome context
chrG8: 20544987-20545082 [+]

Database links

Mature ppe-miR166b

Accession MIMAT0031446
Description Prunus persica ppe-miR166b mature miRNA
Sequence 70 - UCGGACCAGGCUUCAUUCCCC - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149