miRBase entry: ppe-MIR167d

Stem-loop ppe-MIR167d


Accession
MI0026081
Description
Prunus persica ppe-MIR167d precursor miRNA
Gene family
MIPF0000023; MIR167_1

Literature search
10 open access papers mention ppe-MIR167d
(23 sentences)

Sequence

ucaugcauuuguagcaguUGAAGCUGCCAGCAUGAUCUUAaccucccuauuuugguuagggaagaucagaucauguggcaguuucaccuguuauugguagcauga
(((((((((.(((((((.(((((((((((.((((((((...(.((((((.......)))))).)...))))))))))))))))))).))))))).))).))))))

Structure
      -   u       u           G        UAa c      uu 
ucaugc auu guagcag UGAAGCUGCCA CAUGAUCU   c ucccua  u
|||||| ||| ||||||| ||||||||||| ||||||||   | ||||||  u
aguacg ugg uauuguc acuuugacggu guacuaga   g agggau  g
      a   u       c           -        cua a      ug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrG1: 1563673-1563777 [+]

Database links

Mature ppe-miR167d

Accession MIMAT0031453
Description Prunus persica ppe-miR167d mature miRNA
Sequence 19 - UGAAGCUGCCAGCAUGAUCUUA - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149