Stem-loop ppe-MIR172d

Accession

MI0026098

Description

Prunus persica ppe-MIR172d precursor miRNA

Gene family

MIPF0000035; MIR172

Literature search

10 open access papers mention ppe-MIR172d
(36 sentences)

Sequence

agucauuguuugcggauggagcaucaucaagauucacaauuucuuggggcuagcugcuuugcuauuggcccuuugaugauaugGGAAUCUUGAUGAUGCUGCAGcggcaauaaauggcu
(((((((..((((.(.((.((((((((((((((((.(((((((..((((((((..((...))..))))))))..)).))).)).)))))))))))))))).)).).))))..)))))))

Structure

       gu    g a  g                a  -   -  uu        cu  u 
agucauu  uugc g ug agcaucaucaagauuc ca auu uc  ggggcuag  gc  
|||||||  |||| | || |||||||||||||||| || ||| ||  ||||||||  || u
ucgguaa  aacg c AC UCGUAGUAGUUCUAAG gu uag ag  ucccgguu  cg  
       au    g G  G                G  a   u  uu        au  u 

Annotation confidence Not enough data

Genome context

chrG2: 25860595-25860713 [+]

Mature ppe-miR172d

• Accession: MIMAT0031472
• Description: Prunus persica ppe-miR172d mature miRNA
• Sequence: 84 - GGAAUCUUGAUGAUGCUGCAG - 104
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149