miRBase entry: ppe-MIR390

Stem-loop ppe-MIR390


Accession
MI0026099
Description
Prunus persica ppe-MIR390 precursor miRNA
Gene family
MIPF0000101; MIR390

Literature search
6 open access papers mention ppe-MIR390
(25 sentences)

Sequence

cuguaAAGCUCAGGAGGGAUAGCGCCauaugaacaaaaugguuuaauuuauauuaggcauuuguuuuggcgcuaucuauccugaguuucaugg
((((.((((((((((.(((((((((((...(((((((...(((((((....))))))).)))))))))))))))))).)))))))))).))))

Structure
    a          G           uau       aug       u 
cugu AAGCUCAGGA GGAUAGCGCCa   gaacaaa   guuuaau u
|||| |||||||||| |||||||||||   |||||||   |||||||  
ggua uuugaguccu ucuaucgcggu   uuuguuu   cggauua a
    c          a           ---       --a       u 


Annotation confidence Not enough data
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Genome context
chrG6: 3479635-3479727 [-]

Database links

Mature ppe-miR390

Accession MIMAT0031473
Description Prunus persica ppe-miR390 mature miRNA
Sequence 6 - AAGCUCAGGAGGGAUAGCGCC - 26
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149