miRBase entry: ppe-MIR393a

Stem-loop ppe-MIR393a


Accession
MI0026100
Description
Prunus persica ppe-MIR393a precursor miRNA
Gene family
MIPF0000083; MIR393

Literature search
8 open access papers mention ppe-MIR393a
(23 sentences)

Sequence

uagaggaagCAUCCAAAGGGAUCGCAUUGAucccaacuagcuaucucuuccaugguuuaauuuggaucaugcuaucccuuuggauaucuccuuug
(((((((...((((((((((((.((((.(((((.....((((((.......))))))......))))))))).))))))))))))...)))))))

Structure
       agC            C    U     -caacu      cu 
uagagga   AUCCAAAGGGAU GCAU GAucc      agcuau  c
|||||||   |||||||||||| |||| |||||      ||||||  u
guuuccu   uagguuucccua cgua cuagg      uuggua  u
       cua            u    -     uuuaau      cc 


Annotation confidence Not enough data
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Genome context
chrG2: 26224921-26225015 [+]

Database links

Mature ppe-miR393a

Accession MIMAT0031474
Description Prunus persica ppe-miR393a mature miRNA
Sequence 10 - CAUCCAAAGGGAUCGCAUUGA - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22909020
    Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
    Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
    BMC Plant Biol (2012) 12:149