Stem-loop ppe-MIR399h

Accession

MI0026128

Description

Prunus persica ppe-MIR399h precursor miRNA

Gene family

MIPF0000015; MIR399

Literature search

4 open access papers mention ppe-MIR399h
(5 sentences)

Sequence

ucaaauaagcaaagcagucauaggguuccucuuucuuggcaggcacuggugacugauggagcuacaaauguacaaucacuuucauugaccUGCCAAAGAAGAGUUGCCCUAcgauugcuuuggcuuaauga
.....((((((((((((((.((((((..((((((.((((((((((..(((((.((.((.(........).)))).))))).....)).)))))))).))))))..)))))).))))))))).)))))....

Structure

ucaaa     -         a      uc      c        -  ---cu     c  a  g gcu 
     uaagc aaagcaguc uagggu  cucuuu uuggcagg ca     gguga ug ug a   a
     ||||| ||||||||| ||||||  |||||| |||||||| ||     ||||| || || |    
     auucg uuucguuag AUCCCG  GAGAAG AACCGUcc gu     ucacu ac au u   c
-agua     g         c      UU      A        a  uacuu     a  -  g aaa 

Annotation confidence Not enough data

Genome context

chrG3: 1436637-1436767 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppe-MIR399h

Mature ppe-miR399h

• Accession: MIMAT0031504
• Description: Prunus persica ppe-miR399h mature miRNA
• Sequence: 91 - UGCCAAAGAAGAGUUGCCCUA - 111
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22909020
   Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs
   Zhu H, Xia R, Zhao B, An YQ, Dardick CD, Callahan AM, Liu Z
   BMC Plant Biol (2012) 12:149