Stem-loop bbe-mir-100

Accession

MI0026172

Description

Branchiostoma belcheri bbe-mir-100 precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

agauaaagccggcugccauaAACCCGUAGAUCCGAACUUGUGuugcuucaguucaCAAGCUCGUGUCUAUGGGUCUaugucaucagggcaacaucugcau
((((...(((.(.((.((((.((((((((((.(((.((((((..((....)).)))))).))).)))))))))).)))).)).)..)))...))))....

Structure

----    aaa   -g c  c    A          C   A      uu  u 
    agau   gcc  g ug caua ACCCGUAGAU CGA CUUGUG  gc u
    ||||   |||  | || |||| |||||||||| ||| ||||||  ||  
    ucua   cgg  c ac guaU UGGGUAUCUG GCU GAACac  ug c
uacg    caa   ga u  u    C          U   C      -u  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature bbe-miR-100-5p

• Accession: MIMAT0031570
• Description: Branchiostoma belcheri bbe-miR-100-5p mature miRNA
• Sequence: 21 - AACCCGUAGAUCCGAACUUGUG - 42
• Evidence: not_experimental

Mature bbe-miR-100-3p

• Accession: MIMAT0031571
• Description: Branchiostoma belcheri bbe-miR-100-3p mature miRNA
• Sequence: 56 - CAAGCUCGUGUCUAUGGGUCU - 76
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500