miRBase entry: bbe-mir-135a

Stem-loop bbe-mir-135a


Accession
MI0026182
Description
Branchiostoma belcheri bbe-mir-135a precursor miRNA
Gene family
MIPF0000028; mir-135


Sequence

guguucUAUGGCUUUCAUCCUAUGUGAauguuaucgcacauguuCACAUUGGUGGAAGUCAAAGAagacguguguggaaacu
((.((((.(((((((((((..((((((((((........)))))))))).))))))))))).)))).)).............

Structure
-------------  g    A           CU          uau 
             gu uucU UGGCUUUCAUC  AUGUGAaugu   c
             || |||| |||||||||||  ||||||||||    
             ca aAGA ACUGAAGGUGG  UACACuugua   g
ucaaaggugugug  g    A           -U          cac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-135a-5p

Accession MIMAT0031587
Description Branchiostoma belcheri bbe-miR-135a-5p mature miRNA
Sequence 7 - UAUGGCUUUCAUCCUAUGUGA - 27
Evidence not_experimental

Mature bbe-miR-135a-3p

Accession MIMAT0031588
Description Branchiostoma belcheri bbe-miR-135a-3p mature miRNA
Sequence 45 - CACAUUGGUGGAAGUCAAAGA - 65
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500