Stem-loop bbe-mir-182b

Accession

MI0026188

Description

Branchiostoma belcheri bbe-mir-182b precursor miRNA

Gene family

MIPF0000116; mir-182

Sequence

ggaccaguuuuCUUGGCACUUGUGGAAUUCUCUGuuuuguugcauguaaugugcagcuucauggcaucaCAGAAUUCCCCAGUACCAAGGAAacuguucc
(((.((((((((((((.(((.(.((((((((.((((..(((((((.....))))))).....))))....))))))))).))).)))))))))))).)))

Structure

   c            C   U U        ---C    ---uu       g 
gga caguuuuCUUGG ACU G GGAAUUCU    UGuu     guugcau u
||| |||||||||||| ||| | ||||||||    ||||     ||||||| a
ccu gucaAAGGAACC UGA C CCUUAAGA    acgg     cgacgug a
   u            A   C -        Cacu    uacuu       u 

Annotation confidence Not enough data

Genome context

Unknown

Mature bbe-miR-182b-5p

• Accession: MIMAT0031596
• Description: Branchiostoma belcheri bbe-miR-182b-5p mature miRNA
• Sequence: 12 - CUUGGCACUUGUGGAAUUCUCUG - 34
• Evidence: not_experimental

Mature bbe-miR-182b-3p

• Accession: MIMAT0031597
• Description: Branchiostoma belcheri bbe-miR-182b-3p mature miRNA
• Sequence: 70 - CAGAAUUCCCCAGUACCAAGGAA - 92
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500