miRBase entry: bbe-mir-2062

Stem-loop bbe-mir-2062


Accession
MI0026206
Description
Branchiostoma belcheri bbe-mir-2062 precursor miRNA
Gene family
MIPF0001753; mir-2062


Sequence

ccugcucUGCAACAAUAUUUCAUCAGUGGugaacuagugaagccuACUGGUGAAAUGUAGUUGCGUAggaggccggcuacugu
(((.((.((((((.((((((((((((((((...........))).))))))))))))).)))))).)).)))...........

Structure
-----------   g  c      A             -   gaac 
           ccu cu UGCAAC AUAUUUCAUCAGU GGu    u
           ||| || |||||| ||||||||||||| |||    a
           gga gA GCGUUG UGUAAAGUGGUCA ccg    g
ugucaucggcc   g  U      A             u   aagu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-2062-5p

Accession MIMAT0031623
Description Branchiostoma belcheri bbe-miR-2062-5p mature miRNA
Sequence 8 - UGCAACAAUAUUUCAUCAGUGG - 29
Evidence not_experimental

Mature bbe-miR-2062-3p

Accession MIMAT0031624
Description Branchiostoma belcheri bbe-miR-2062-3p mature miRNA
Sequence 46 - ACUGGUGAAAUGUAGUUGCGUA - 67
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500