miRBase entry: bbe-mir-22

Stem-loop bbe-mir-22


Accession
MI0026225
Description
Branchiostoma belcheri bbe-mir-22 precursor miRNA
Gene family
MIPF0000053; mir-22

Literature search
1 open access papers mention bbe-mir-22
(4 sentences)

Sequence

cgcucugagaagcguAGCUCUUCACUCGGUAGCUCUGuguuuaucugaucaAAGCUGCCAGAUGAAGAGCUGUgcuuccagggca
.((((((.((((((((((((((((((.(((((((.((.(((.....))))).))))))))).)))))))))))))))))))))).

Structure
c      a                -  C       C  u   u 
 gcucug gaagcguAGCUCUUCA CU GGUAGCU UG guu a
 |||||| |||||||||||||||| || ||||||| || ||| u
 cgggac cuucgUGUCGAGAAGU GA CCGUCGA ac uag c
a      -                A  -       A  -   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-22-5p

Accession MIMAT0031652
Description Branchiostoma belcheri bbe-miR-22-5p mature miRNA
Sequence 16 - AGCUCUUCACUCGGUAGCUCUG - 37
Evidence not_experimental

Mature bbe-miR-22-3p

Accession MIMAT0031653
Description Branchiostoma belcheri bbe-miR-22-3p mature miRNA
Sequence 52 - AAGCUGCCAGAUGAAGAGCUGU - 73
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500