Stem-loop bbe-mir-252a

Accession

MI0026227

Description

Branchiostoma belcheri bbe-mir-252a precursor miRNA

Gene family

MIPF0000285; mir-252

Literature search

1 open access papers mention bbe-mir-252a
(2 sentences)

Sequence

aaugacuggccugcuccaugCUAAGUACUAGUGCCGCAGGUGUcuguguuuccucgaaccccuGCAGACUGGUGCUUAACAUgggacagguaauacugccaccu
........(((((.((((((.(((((((((((.(.(((((.((.((........)).)).))))).)))))))))))).)))))).))))).............

Structure

-----aaugacug     c      C           G C     U  c  ugu 
             gccug uccaug UAAGUACUAGU C GCAGG GU ug   u
             ||||| |||||| ||||||||||| | ||||| || ||    
             uggac gggUAC AUUCGUGGUCA G CGucc ca gc   u
uccaccgucauaa     a      A           - A     c  a  ucc 

Annotation confidence Not enough data

Genome context

Unknown

Mature bbe-miR-252a-5p

• Accession: MIMAT0031655
• Description: Branchiostoma belcheri bbe-miR-252a-5p mature miRNA
• Sequence: 21 - CUAAGUACUAGUGCCGCAGGUGU - 43
• Evidence: not_experimental

Mature bbe-miR-252a-3p

• Accession: MIMAT0031656
• Description: Branchiostoma belcheri bbe-miR-252a-3p mature miRNA
• Sequence: 64 - GCAGACUGGUGCUUAACAU - 82
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500