Stem-loop bbe-mir-252b

Accession

MI0026228

Description

Branchiostoma belcheri bbe-mir-252b precursor miRNA

Gene family

MIPF0000285; mir-252

Literature search

1 open access papers mention bbe-mir-252b
(2 sentences)

Sequence

gaaagcgacugucucugUGCUAAGUAGUACUGCCGCAGGGAgugcugcggacugauucuaucCCCUGCGCAGUCCUACUUACAAcagggaacauuucuaau
((((.....(((((((((..(((((((.(((((.(((((((((.(...).))).........))))))))))).)))))))..)))))).)))))))....

Structure

----    gcgac   -      GC       U     C      ---------   g u 
    gaaa     ugu cucugU  UAAGUAG ACUGC GCAGGG         Agu c  
    ||||     ||| ||||||  ||||||| ||||| ||||||         ||| | g
    cuuu     aca gggacA  AUUCAUC UGACG CGUCCC         uca g  
uaau    -----   a      AC       C     -      cuaucuuag   g c 

Annotation confidence Not enough data

Genome context

Unknown

Mature bbe-miR-252b-5p

• Accession: MIMAT0031657
• Description: Branchiostoma belcheri bbe-miR-252b-5p mature miRNA
• Sequence: 18 - UGCUAAGUAGUACUGCCGCAGGGA - 41
• Evidence: not_experimental

Mature bbe-miR-252b-3p

• Accession: MIMAT0031658
• Description: Branchiostoma belcheri bbe-miR-252b-3p mature miRNA
• Sequence: 63 - CCCUGCGCAGUCCUACUUACAA - 84
• Evidence: not_experimental

References

1. PubMed ID: 23335747
   Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
   "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
   "J Immunol (2013) 190:1491-1500