miRBase entry: bbe-mir-281

Stem-loop bbe-mir-281


Accession
MI0026230
Description
Branchiostoma belcheri bbe-mir-281 precursor miRNA
Gene family
MIPF0000087; mir-46

Literature search
1 open access papers mention bbe-mir-281
(2 sentences)

Sequence

uuucccgccucugugcggaaGGGAGAGCCUUUCCGUGACUGUcgaacuucgggaacacUGUCAUGGAGUUGCUCUCUUUUccgcg
..............((((((((((((((..((((((((((.((((...)))).).....)))))))))..)))))))))))))).

Structure
uuucccgccucugu              CU         ----- G    a 
              gcggaaGGGAGAGC  UUCCGUGAC     U Ucga  
              ||||||||||||||  |||||||||     | |||| c
              cgccUUUUCUCUCG  GAGGUACUG     a ggcu  
-------------g              UU         Ucaca g    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-281-5p

Accession MIMAT0031660
Description Branchiostoma belcheri bbe-miR-281-5p mature miRNA
Sequence 21 - GGGAGAGCCUUUCCGUGACUGU - 42
Evidence not_experimental

Mature bbe-miR-281-3p

Accession MIMAT0031661
Description Branchiostoma belcheri bbe-miR-281-3p mature miRNA
Sequence 59 - UGUCAUGGAGUUGCUCUCUUUU - 80
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500