miRBase entry: bbe-mir-33-1

Stem-loop bbe-mir-33-1


Accession
MI0026234
Description
Branchiostoma belcheri bbe-mir-33-1 precursor miRNA
Gene family
MIPF0000070; mir-33

Literature search
1 open access papers mention bbe-mir-33-1
(1 sentences)

Sequence

agaccuguugcugggGUGCAUUGUAGUUGCAUUGCAuguguguucauugcugCAAUGUAACUGCAGUGCAGCCcagaggcaggaac
...((((((.(((((.((((((((((((((((((((.(((....)))...)))))))))))))))))))).))))).))))))...

Structure
aga      g     G                    --u   u 
   ccuguu cuggg UGCAUUGUAGUUGCAUUGCA   gug g
   |||||| ||||| ||||||||||||||||||||   |||  
   ggacgg gacCC ACGUGACGUCAAUGUAACgu   uac u
caa      a     G                    cgu   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-33-5p

Accession MIMAT0031668
Description Branchiostoma belcheri bbe-miR-33-5p mature miRNA
Sequence 16 - GUGCAUUGUAGUUGCAUUGCA - 36
Evidence not_experimental

Mature bbe-miR-33-3p

Accession MIMAT0031669
Description Branchiostoma belcheri bbe-miR-33-3p mature miRNA
Sequence 53 - CAAUGUAACUGCAGUGCAGCC - 73
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500