miRBase entry: bbe-mir-4891

Stem-loop bbe-mir-4891


Accession
MI0026265
Description
Branchiostoma belcheri bbe-mir-4891 precursor miRNA
Gene family
MIPF0001856; mir-4891


Sequence

uggcuguuugggAAGAUGAGCUGUUCUGCUACGGcugcgugucagacuaGCGUAGCAGGACCCUCGUCUGCccaaacgucuggccucu
.(((((((((((.(((((((..(((((((((((.(((.((.....)))))))))))))))).))))))).)))))))....))))...

Structure
--u    ----       A       CU           G   c  g 
   ggcu    guuuggg AGAUGAG  GUUCUGCUACG cug gu u
   ||||    ||||||| |||||||  ||||||||||| ||| || c
   ccgg    caaaccC UCUGCUC  CAGGACGAUGC Gau ca a
ucu    ucug       G       -C           -   -  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-4891-5p

Accession MIMAT0031708
Description Branchiostoma belcheri bbe-miR-4891-5p mature miRNA
Sequence 13 - AAGAUGAGCUGUUCUGCUACGG - 34
Evidence not_experimental

Mature bbe-miR-4891-3p

Accession MIMAT0031709
Description Branchiostoma belcheri bbe-miR-4891-3p mature miRNA
Sequence 50 - GCGUAGCAGGACCCUCGUCUGC - 71
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500