miRBase entry: bbe-mir-71

Stem-loop bbe-mir-71


Accession
MI0026271
Description
Branchiostoma belcheri bbe-mir-71 precursor miRNA
Gene family
MIPF0000278; mir-71

Literature search
1 open access papers mention bbe-mir-71
(2 sentences)

Sequence

ugucuaguugccacuacauugUGAAAGACAUGGGUAGUGAGAUuuguaucauggagucauCCCAUUUCCCUGUCUUUCAACAaggugcuggcaguuuagca
((.((((.(((((.(((.((((((((((((.(((.((((.((..((..((...))..)))).)))).))))))))))).)))).))).)))))..))))))

Structure
  u    -u     c   a    -        U   U    A  Uu  ua  a 
ug cuag  ugcca uac uugU GAAAGACA GGG AGUG GA  ug  uc  
|| ||||  ||||| ||| |||| |||||||| ||| |||| ||  ||  || u
ac gauu  acggu gug aACA CUUUCUGU CCC UUAC Cu  ac  ag  
  -    ug     c   g    A        -   U    C  --  ug  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-71-5p

Accession MIMAT0031717
Description Branchiostoma belcheri bbe-miR-71-5p mature miRNA
Sequence 22 - UGAAAGACAUGGGUAGUGAGAU - 43
Evidence not_experimental

Mature bbe-miR-71-3p

Accession MIMAT0031718
Description Branchiostoma belcheri bbe-miR-71-3p mature miRNA
Sequence 61 - CCCAUUUCCCUGUCUUUCAACA - 82
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500