miRBase entry: bbe-mir-2060c-1

Stem-loop bbe-mir-2060c-1


Accession
MI0026281
Description
Branchiostoma belcheri bbe-mir-2060c-1 precursor miRNA
Gene family
MIPF0001654; mir-2060


Sequence

guuuaccuguguguggaugguguucagcaccaaggacagguguguuuaccuguguguggaugguGUUCAGCACCAAGGACAGGCauguuuacuu
((..((.(((.(((...(((((((.(((((((.(.(((((((....))))))).).....))))))).)))))))...))).))).))..))..

Structure
--  uu  c   g   gga       c       ----a g       u 
  gu  ac ugu ugu   ugguguu agcacca     g acaggug g
  ||  || ||| |||   ||||||| |||||||     | |||||||  
  ca  ug aCG ACA   ACCACGA UUGuggu     u uguccau u
uu  uu  u   G   GGA       C       aggug g       u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bbe-miR-2060c-3p

Accession MIMAT0031732
Description Branchiostoma belcheri bbe-miR-2060c-3p mature miRNA
Sequence 65 - GUUCAGCACCAAGGACAGGC - 84
Evidence not_experimental

References

  1. PubMed ID: 23335747
    Genome-wide analyses of amphioxus microRNAs reveal an immune regulation via miR-92d targeting C3
    "Yang R, Zheng T, Cai X, Yu Y, Yu C, Guo L, Huang S, Zhu W, Zhu R, Yan Q, Ren Z, Chen S, Xu A"
    "J Immunol (2013) 190:1491-1500