Stem-loop hbv-mir-B7

Accession

MI0026321

Description

Herpes B virus hbv-mir-B7 precursor miRNA

Sequence

ccccUUCUGGGCCUCGGGUUCGCUUCcgcccacggccggccgggaagcgguguccgacgcccggaggg
..((((((((((.(((((.(((((((((((.......)))..))))))))..))))).))))))))))

Structure

cc          C     -U        --   ca 
  ccUUCUGGGC UCGGG  UCGCUUCc  gcc  c
  |||||||||| |||||  ||||||||  |||  g
  gggaggcccg agccu  ggcgaagg  cgg  g
--          c     gu        gc   cc 

Annotation confidence Not enough data

Genome context

NC_004812: 126417-126484 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from hbv-mir-B7

Mature hbv-miR-B7-5p

• Accession: MIMAT0031766
• Description: Herpes B virus hbv-miR-B7-5p mature miRNA
• Sequence: 5 - UUCUGGGCCUCGGGUUCGCUUC - 26
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21543500
   Identification and expression analysis of herpes B virus-encoded small RNAs
   "Amen MA, Griffiths A"
   "J Virol (2011) 85:7296-7311