Stem-loop hbv-mir-B21RC

Accession

MI0026324

Description

Herpes B virus hbv-mir-B21RC precursor miRNA

Sequence

gggaGCGCCGGGGUGCGAACCUGGGGcggaaggacgcagagccucgggguugcagcccgcgugcucg
..((((((((((.(((((.((((((((.............)))))))).))))).)))).)))))).

Structure

gg      -    G     A        ggaag 
  gaGCGC CGGG UGCGA CCUGGGGc     g
  |||||| |||| ||||| ||||||||     a
  cucgug gccc acguu gggcuccg     c
-g      c    g     g        agacg 

Annotation confidence Not enough data

Genome context

NC_004812: 126260-126326 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from hbv-mir-B21RC

Mature hbv-miR-B21RC-5p

• Accession: MIMAT0031770
• Description: Herpes B virus hbv-miR-B21RC-5p mature miRNA
• Sequence: 5 - GCGCCGGGGUGCGAACCUGGGG - 26
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21543500
   Identification and expression analysis of herpes B virus-encoded small RNAs
   "Amen MA, Griffiths A"
   "J Virol (2011) 85:7296-7311