miRBase entry: hbv-mir-B26

Stem-loop hbv-mir-B26


Accession
MI0026325
Description
Herpes B virus hbv-mir-B26 precursor miRNA


Sequence

cgUGAGUUCGGGCAGCAGGCGCGUgcgcacgcaggcgcgccggcggcccgggcucgcg
(((((((((((((.((.(((((((((....))..))))))).)).)))))))))))))

Structure
             A  A       --  g 
cgUGAGUUCGGGC GC GGCGCGU  gc c
||||||||||||| || |||||||  ||  
gcgcucgggcccg cg ccgcgcg  cg a
             g  g       ga  c 


Annotation confidence Not enough data
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Genome context
NC_004812: 454-511 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from hbv-mir-B26
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hbv-miR-B26-5p

Accession MIMAT0031771
Description Herpes B virus hbv-miR-B26-5p mature miRNA
Sequence 3 - UGAGUUCGGGCAGCAGGCGCGU - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21543500
    Identification and expression analysis of herpes B virus-encoded small RNAs
    "Amen MA, Griffiths A"
    "J Virol (2011) 85:7296-7311