Stem-loop hbv-mir-B14RC

Accession

MI0026326

Description

Herpes B virus hbv-mir-B14RC precursor miRNA

Sequence

ccuccgccgcucucucacggacuccccuacuguggugauggaagAGGAGGGGUCUGGGAGAGAAGGGcggggg
((((((((..((((((.(((((((((((.((((....))))...))).)))))))).))))))..))))))))

Structure

        gc      a        -   --a    g 
ccuccgcc  ucucuc cggacucc ccu   cugu g
||||||||  |||||| |||||||| |||   ||||  
gggggcGG  AGAGAG GUCUGGGG GGA   ggua u
        GA      G        A   gaa    g 

Annotation confidence Not enough data

Genome context

NC_004812: 7403-7475 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from hbv-mir-B14RC

Mature hbv-miR-B14RC-3p

• Accession: MIMAT0031772
• Description: Herpes B virus hbv-miR-B14RC-3p mature miRNA
• Sequence: 45 - AGGAGGGGUCUGGGAGAGAAGGG - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21543500
   Identification and expression analysis of herpes B virus-encoded small RNAs
   "Amen MA, Griffiths A"
   "J Virol (2011) 85:7296-7311