Stem-loop hbv-mir-B22

Accession

MI0026327

Description

Herpes B virus hbv-mir-B22 precursor miRNA

Sequence

cccccgcccuucucucccagaccccuccucuuccaucaccacagUAGGGGAGUCCGUGAGAGAGCGGcggaggg
((((((((.(((((((.(.(((.((((..((...........))..)))).))).).))))))).))))).)))

Structure

   -     c       c a   c    cu  ucca 
ccc ccgcc uucucuc c gac ccuc  cu    u
||| ||||| ||||||| | ||| ||||  ||    c
ggg ggcGG GAGAGAG G CUG GGGG  ga    a
   a     C       U C   A    AU  cacc 

Annotation confidence Not enough data

Genome context

NC_004812: 7402-7475 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from hbv-mir-B22

Mature hbv-miR-B22-3p

• Accession: MIMAT0031773
• Description: Herpes B virus hbv-miR-B22-3p mature miRNA
• Sequence: 45 - UAGGGGAGUCCGUGAGAGAGCGG - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21543500
   Identification and expression analysis of herpes B virus-encoded small RNAs
   "Amen MA, Griffiths A"
   "J Virol (2011) 85:7296-7311