Stem-loop cpa-MIR156b

Accession

MI0026329

Description

Carica papaya cpa-MIR156b precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

2 open access papers mention cpa-MIR156b
(19 sentences)

Sequence

UGACAGAAGAGAGUGAGCACacgcaggcaauuguaugaaggcauaccuuugcgggugcgugcucacuucucuuucugucagc
((((((((((((((((((((.(((..((((..(((((....)))))..))))..))).)))))))).)))).))))))))..

Structure

--        -    -        a   ag    uu     a 
  UGACAGAA GAGA GUGAGCAC cgc  gcaa  guaug a
  |||||||| |||| |||||||| |||  ||||  |||||  
  acugucuu cucu cacucgug gug  cguu  cauac g
cg        u    u        c   gg    uc     g 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR156b

• Accession: MIMAT0031775
• Description: Carica papaya cpa-miR156b mature miRNA
• Sequence: 1 - UGACAGAAGAGAGUGAGCAC - 20
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682