Stem-loop cpa-MIR156e

Accession

MI0026332

Description

Carica papaya cpa-MIR156e precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

2 open access papers mention cpa-MIR156e
(17 sentences)

Sequence

UUGACAGAAGAUAGAGAGCACagaugaugaaaugcaaauuagaaggaccaaacagugcaucucacuccuuugugcucucuauucuucugucauca
.(((((((((((((((((((((((.(((((.(((((...................))))).))).)).))))))))))))).))))))))))...

Structure

--U          -             u  -   a     aauuagaa 
   UGACAGAAGA UAGAGAGCACaga ga uga augca        g
   |||||||||| ||||||||||||| || ||| |||||        g
   acugucuucu aucucucguguuu cu acu uacgu        a
acu          u             c  c   c     gacaaacc 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR156e

• Accession: MIMAT0031778
• Description: Carica papaya cpa-miR156e mature miRNA
• Sequence: 1 - UUGACAGAAGAUAGAGAGCAC - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682