Stem-loop cpa-MIR156f

Accession

MI0026333

Description

Carica papaya cpa-MIR156f precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

2 open access papers mention cpa-MIR156f
(17 sentences)

Sequence

UUGACAGAAGAUAGAGAGCACagaugaugauaugcaauucauuaauggaucagaucaacucucugcaucucacuccuuugugcucucuaugcuucugucauca
.(((((((((((((((((((((((.(((((.((((((((((....))))).............))))).))).)).)))))))))))))).)))))))))...

Structure

--U         -              u  -   u     -------------     u 
   UGACAGAAG AUAGAGAGCACaga ga uga augca             auuca u
   ||||||||| |||||||||||||| || ||| |||||             |||||  
   acugucuuc uaucucucguguuu cu acu uacgu             uaggu a
acu         g              c  c   c     cucucaacuagac     a 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR156f

• Accession: MIMAT0031779
• Description: Carica papaya cpa-miR156f mature miRNA
• Sequence: 1 - UUGACAGAAGAUAGAGAGCAC - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682