Stem-loop cpa-MIR164a

Accession

MI0026343

Description

Carica papaya cpa-MIR164a precursor miRNA

Gene family

MIPF0000045; MIR164

Literature search

2 open access papers mention cpa-MIR164a
(7 sentences)

Sequence

UGGAGAAGCAGGGCACGUGCAaaggcuagauauugacaccugcauugcacgugcuccccuucuccaac
((((((((..((((((((((((..((.((..........)))).))))))))))))..))))))))..

Structure

--        CA            ag  u  auau 
  UGGAGAAG  GGGCACGUGCAa  gc ag    u
  ||||||||  ||||||||||||  || ||     
  accucuuc  cucgugcacguu  cg uc    g
ca        cc            -a  -  caca 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR164a

• Accession: MIMAT0031791
• Description: Carica papaya cpa-miR164a mature miRNA
• Sequence: 1 - UGGAGAAGCAGGGCACGUGCA - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682