Stem-loop cpa-MIR164b

Accession

MI0026344

Description

Carica papaya cpa-MIR164b precursor miRNA

Gene family

MIPF0000045; MIR164

Literature search

2 open access papers mention cpa-MIR164b
(7 sentences)

Sequence

UGGAGAAGCAGGGCACGUGCAuuacuaacucaugcacgauuuuuuauauauacccgcacccaaugaguuaguucuucaugugcccgucuuccccauc
(((.((((..(((((((((....((((((((((.............................))))))))))....)))))))))..)))).)))..

Structure

--   A    CA         CAuu          gcacgauuuuuua 
  UGG GAAG  GGGCACGUG    acuaacucau             u
  ||| ||||  |||||||||    ||||||||||             a
  acc cuuc  cccguguac    ugauugagua             u
cu   c    ug         uucu          acccacgcccaua 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR164b

• Accession: MIMAT0031792
• Description: Carica papaya cpa-miR164b mature miRNA
• Sequence: 1 - UGGAGAAGCAGGGCACGUGCA - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682