Stem-loop cpa-MIR164e

Accession

MI0026347

Description

Carica papaya cpa-MIR164e precursor miRNA

Gene family

MIPF0001794; MIR164_3

Literature search

2 open access papers mention cpa-MIR164e
(7 sentences)

Sequence

UGGAGAAGGGGAGCACGUGCAaagaggggaaagccauggagaauuugcacgugcccugcuucuccaac
((((((((.((.(((((((((((...((.....))........))))))))))).)).))))))))..

Structure

--        G  A           -----gag  g 
  UGGAGAAG GG GCACGUGCAaa        gg a
  |||||||| || |||||||||||        || a
  accucuuc uc cgugcacguuu        cc a
ca        g  c           aagaggua  g 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR164e

• Accession: MIMAT0031795
• Description: Carica papaya cpa-miR164e mature miRNA
• Sequence: 1 - UGGAGAAGGGGAGCACGUGCA - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682