Stem-loop cpa-MIR166e

Accession

MI0026352

Description

Carica papaya cpa-MIR166e precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

2 open access papers mention cpa-MIR166e
(8 sentences)

Sequence

ggaauguuggcuggcucgaggcuuugacaaaacaggguucuucugcaacaagaacuucaaaaaggcuucGGACCAGGCUUCAUUCCCC
((((((..(.((((.((((((((((.........((((((((.......))))))))....)))))))))).)))).)..))))))..

Structure

--      uu g    c          gacaaaaca        cu 
  ggaaug  g cugg ucgaggcuuu         ggguucuu  g
  ||||||  | |||| ||||||||||         ||||||||  c
  CCUUAC  C GACC GGcuucggaa         uucaagaa  a
CC      UU G    A          -----aaac        ca 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR166e

• Accession: MIMAT0031800
• Description: Carica papaya cpa-miR166e mature miRNA
• Sequence: 70 - GGACCAGGCUUCAUUCCCC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682