Stem-loop cpa-MIR394a

Accession

MI0026367

Description

Carica papaya cpa-MIR394a precursor miRNA

Gene family

MIPF0000100; MIR394

Literature search

1 open access papers mention cpa-MIR394a
(1 sentences)

Sequence

UUGGCAUUCUGUCCACCUCCauuauacccaauucagcucgccuucuguuuggaggcggccaggaugucaaac
(((((((((((.((.((((((............(((........)))..)))))).)).)))))))))))..

Structure

--           U  A      uuauacccaauu   cuc 
  UUGGCAUUCUG CC CCUCCa            cag   g
  ||||||||||| || ||||||            |||    
  aacuguaggac gg ggaggu            guc   c
ca           c  c      ----------uu   uuc 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR394a

• Accession: MIMAT0031815
• Description: Carica papaya cpa-miR394a mature miRNA
• Sequence: 1 - UUGGCAUUCUGUCCACCUCC - 20
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682