miRBase entry: cpa-MIR395a

Stem-loop cpa-MIR395a


Accession
MI0026369
Description
Carica papaya cpa-MIR395a precursor miRNA
Gene family
MIPF0000016; MIR395


Sequence

guucccuuaaacacuucacuggauguuaucauuccacUGAAGUGUUUGGGGGAACUC
((((((((((((((((((.((((((....)).)))).))))))))))))))))))..

Structure
--                  c    -  u 
  guucccuuaaacacuuca ugga ug u
  |||||||||||||||||| |||| ||  
  CAAGGGGGUUUGUGAAGU accu ac a
CU                  c    u  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cpa-miR395a

Accession MIMAT0031817
Description Carica papaya cpa-miR395a mature miRNA
Sequence 38 - UGAAGUGUUUGGGGGAACUC - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23216749
    Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
    Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
    BMC Genomics (2012) 13:682