miRBase entry: cpa-MIR395d

Stem-loop cpa-MIR395d


Accession
MI0026372
Description
Carica papaya cpa-MIR395d precursor miRNA
Gene family
MIPF0000016; MIR395


Sequence

guuucccugaccacuucaaugcaugcgggcucauuuuaggccuaauacUGAAGUGUUUGGGGGAACUC
((((((((((.(((((((..(.((..(((((.......))))).)).)))))))).))))))))))..

Structure
--          c       au c  gc     ca 
  guuucccuga cacuuca  g au  gggcu  u
  |||||||||| |||||||  | ||  |||||  u
  CAAGGGGGUU GUGAAGU  c ua  uccgg  u
CU          U       -- a  -a     au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cpa-miR395d

Accession MIMAT0031820
Description Carica papaya cpa-miR395d mature miRNA
Sequence 49 - UGAAGUGUUUGGGGGAACUC - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23216749
    Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
    Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
    BMC Genomics (2012) 13:682