Stem-loop cpa-MIR395e

Accession

MI0026373

Description

Carica papaya cpa-MIR395e precursor miRNA

Gene family

MIPF0000016; MIR395

Sequence

guuccccugagcacuucaccggagauauauauauauauauauaucaaucucgcUGAAGUGUUUGGGGGAACUC
((((((((((((((((((.(((((((((((((....)))))))))..)).)).))))))))))))))))))..

Structure

--                  c  -  --         a 
  guuccccugagcacuuca cg ga  gauauauau u
  |||||||||||||||||| || ||  |||||||||  
  CAAGGGGGUUUGUGAAGU gc cu  cuauauaua a
CU                  c  u  aa         u 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR395e

• Accession: MIMAT0031821
• Description: Carica papaya cpa-miR395e mature miRNA
• Sequence: 54 - UGAAGUGUUUGGGGGAACUC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682