Stem-loop cpa-MIR535

Accession

MI0026376

Description

Carica papaya cpa-MIR535 precursor miRNA

Gene family

MIPF0000136; MIR535

Sequence

UGACAACGAGAGAGAGCACGCuuguuaucacucauccgagguauaugauuguguacgggcgugcucuaugucguugucaua
(((((((((.(.(((((((((((((...((.((((.........)))).))...))))))))))))).).)))))))))..

Structure

--         G G             uau  c    ccg 
  UGACAACGA A AGAGCACGCuugu   ca ucau   a
  ||||||||| | |||||||||||||   || ||||   g
  acuguugcu u ucucgugcgggca   gu agua   g
au         g a             ugu  u    uau 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR535

• Accession: MIMAT0031824
• Description: Carica papaya cpa-miR535 mature miRNA
• Sequence: 1 - UGACAACGAGAGAGAGCACGC - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682