miRBase entry: cpa-MIR8139b

Stem-loop cpa-MIR8139b


Accession
MI0026385
Description
Carica papaya cpa-MIR8139b precursor miRNA
Gene family
MIPF0001665; MIR8139


Sequence

UCCUGGCUGAGGACGGGUGUUGAAgcuccuuuccacaaucugugccuuugcuaggacu
(((((((.((((((((((((.((((....)))).)).)))))).)))).)))))))..

Structure
--       U    -      -  U    c 
  UCCUGGC GAGG ACGGGU GU GAAg u
  ||||||| |||| |||||| || ||||  
  aggaucg uucc ugucua ca cuuu c
uc       u    g      a  c    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cpa-miR8139b

Accession MIMAT0031833
Description Carica papaya cpa-miR8139b mature miRNA
Sequence 1 - UCCUGGCUGAGGACGGGUGUUGAA - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23216749
    Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
    Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
    BMC Genomics (2012) 13:682