Stem-loop cpa-MIR8142

Accession

MI0026391

Description

Carica papaya cpa-MIR8142 precursor miRNA

Sequence

UGAGGUAAGUAGACAGUAAAGGUUuuuauuauugauaaaugaguuuguuauaaauuauacuccauuggucguuuuuguuuucuaccaaacuuuacg
((((((..(((((.((((((((..........((((.(((((((.((........)).))).)))).)))))))))))).)))))...))))))..

Structure

--      -AA     C        UUuuuauuau    a    -   u  uua 
  UGAGGU   GUAGA AGUAAAGG          ugau aaug agu ug   u
  ||||||   ||||| ||||||||          |||| |||| ||| ||    
  auuuca   caucu uuguuuuu          gcug uuac uca au   a
gc      aac     u        ----------    g    c   u  uaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR8142

• Accession: MIMAT0031839
• Description: Carica papaya cpa-miR8142 mature miRNA
• Sequence: 1 - UGAGGUAAGUAGACAGUAAAGGUU - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682