Stem-loop cpa-MIR8144

Accession

MI0026393

Description

Carica papaya cpa-MIR8144 precursor miRNA

Sequence

auuucuaauuuaauuuauguguuuucuauuauaaacgaggaaaacuauucaaacggucuucagauuuucgagagAACAGUAGAACGAGUUAGAAAGGA
.((((((((((..(((((.((((((((.........(((((...............))))).........)))))))))))))..))))))))))...

Structure

--a          aa     g        auuauaaac     aaacua 
   uuucuaauuu  uuuau uguuuucu         gagga      u
   ||||||||||  ||||| ||||||||         |||||      u
   AAAGAUUGAG  AGAUG ACAAgaga         cuucu      c
AGG          CA     -        gcuuuuaga     ggcaaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature cpa-miR8144

• Accession: MIMAT0031841
• Description: Carica papaya cpa-miR8144 mature miRNA
• Sequence: 75 - AACAGUAGAACGAGUUAGAAAGGA - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23216749
   Asymmetric purine-pyrimidine distribution in cellular small RNA population of papaya
   Aryal R, Yang X, Yu Q, Sunkar R, Li L, Ming R
   BMC Genomics (2012) 13:682